Blar i NTNU Open på forfatter "Mazein, Alexander"

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    • GraphML-SBGN bidirectional converter for metabolic networks 

      Balaur, Irina; Roy, Ludovic; Touré, Vasundra; Mazein, Alexander; Auffray, Charles (Peer reviewed; Journal article, 2022)
      Systems biology researchers need feasible solutions for editing and visualisation of large biological diagrams. Here, we present the ySBGN bidirectional converter that translates metabolic pathways, developed in the ...

    • Systems biology graphical notation markup language (SBGNML) version 0.3 

      Bergmann, Frank T.; Czauderna, Tobias; Dogrusoz, Ugur; Rougny, Adrien; Dräger, Andreas; Touré, Vasundra; Mazein, Alexander; Blinov, Michael L.; Luna, Augustin (Peer reviewed; Journal article, 2020)
      This document defines Version 0.3 Markup Language (ML) support for the Systems BiologyGraphical Notation (SBGN), a set of three complementary visual languages developed for biochemists, mod-elers, and computer ...

    • Systems Biology Graphical Notation: Process Description language Level 1 Version 2.0 

      Rougny, Adrien; Touré, Vasundra; Moodie, Stuart; Balaur, Irina; Czauderna, Tobias; Borlinghaus, Hanna; Dogrusoz, Ugur; Mazein, Alexander; Dräger, Andreas; Blinov, Michael L.; Villéger, Alice; Haw, Robin; Demir, Emek; Mi, Huaiyu; Sorokin, Anatoly; Schreiber, Falk; Luna, Augustin (Journal article; Peer reviewed, 2019)
      The Systems Biology Graphical Notation (SBGN) is an international community effort that aims to standardise the visualisation of pathways and networks for readers with diverse scientific backgrounds as well as to support ...